GlucoseStorage.swift 15 KB

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  1. import AVFAudio
  2. import CoreData
  3. import Foundation
  4. import SwiftDate
  5. import SwiftUI
  6. import Swinject
  7. protocol GlucoseStorage {
  8. func storeGlucose(_ glucose: [BloodGlucose])
  9. func syncDate() -> Date
  10. func filterTooFrequentGlucose(_ glucose: [BloodGlucose], at: Date) -> [BloodGlucose]
  11. func lastGlucoseDate() -> Date
  12. func isGlucoseFresh() -> Bool
  13. func nightscoutGlucoseNotUploaded() -> [BloodGlucose]
  14. func nightscoutCGMStateNotUploaded() -> [NigtscoutTreatment]
  15. func nightscoutManualGlucoseNotUploaded() -> [NigtscoutTreatment]
  16. var alarm: GlucoseAlarm? { get }
  17. func fetchGlucose() -> [GlucoseStored]
  18. }
  19. final class BaseGlucoseStorage: GlucoseStorage, Injectable {
  20. private let processQueue = DispatchQueue(label: "BaseGlucoseStorage.processQueue")
  21. @Injected() private var storage: FileStorage!
  22. @Injected() private var broadcaster: Broadcaster!
  23. @Injected() private var settingsManager: SettingsManager!
  24. let coredataContext = CoreDataStack.shared.persistentContainer.newBackgroundContext()
  25. private enum Config {
  26. static let filterTime: TimeInterval = 3.5 * 60
  27. }
  28. init(resolver: Resolver) {
  29. injectServices(resolver)
  30. }
  31. private var glucoseFormatter: NumberFormatter {
  32. let formatter = NumberFormatter()
  33. formatter.numberStyle = .decimal
  34. formatter.maximumFractionDigits = 0
  35. if settingsManager.settings.units == .mmolL {
  36. formatter.maximumFractionDigits = 1
  37. }
  38. formatter.decimalSeparator = "."
  39. return formatter
  40. }
  41. func storeGlucose(_ glucose: [BloodGlucose]) {
  42. processQueue.sync {
  43. debug(.deviceManager, "Start storage of glucose data")
  44. self.coredataContext.perform {
  45. let datesToCheck: Set<Date?> = Set(glucose.compactMap { $0.dateString as Date? })
  46. let fetchRequest: NSFetchRequest<NSFetchRequestResult> = GlucoseStored.fetchRequest()
  47. fetchRequest.predicate = NSCompoundPredicate(andPredicateWithSubpredicates: [
  48. NSPredicate(format: "date IN %@", datesToCheck),
  49. NSPredicate.predicateForOneDayAgo
  50. ])
  51. fetchRequest.propertiesToFetch = ["date"]
  52. fetchRequest.resultType = .dictionaryResultType
  53. var existingDates = Set<Date>()
  54. do {
  55. let results = try self.coredataContext.fetch(fetchRequest) as? [NSDictionary]
  56. existingDates = Set(results?.compactMap({ $0["date"] as? Date }) ?? [])
  57. } catch {
  58. debugPrint("Failed to fetch existing glucose dates: \(error)")
  59. }
  60. var filteredGlucose = glucose.filter { !existingDates.contains($0.dateString) }
  61. // prepare batch insert
  62. let batchInsert = NSBatchInsertRequest(entity: GlucoseStored.entity(), dictionaryHandler: { (dict) -> Bool in
  63. guard !filteredGlucose.isEmpty else {
  64. return true // Stop if there are no more items
  65. }
  66. let glucoseEntry = filteredGlucose.removeFirst()
  67. dict["id"] = UUID()
  68. dict["glucose"] = Int16(glucoseEntry.glucose ?? 0)
  69. dict["date"] = glucoseEntry.dateString
  70. dict["direction"] = glucoseEntry.direction?.symbol
  71. return false // Continue processing
  72. })
  73. batchInsert.resultType = .objectIDs
  74. // process batch insert and merge changes to context
  75. do {
  76. if let result = try self.coredataContext.execute(batchInsert) as? NSBatchInsertResult,
  77. let objectIDs = result.result as? [NSManagedObjectID]
  78. {
  79. // Merges the insertions into the context
  80. NSManagedObjectContext.mergeChanges(
  81. fromRemoteContextSave: [NSInsertedObjectsKey: objectIDs],
  82. into: [self.coredataContext]
  83. )
  84. debugPrint(
  85. "Glucose Storage: \(#function) \(DebuggingIdentifiers.succeeded) saved glucose to Core Data and merged changes into coreDataContext"
  86. )
  87. }
  88. } catch {
  89. debugPrint(
  90. "Glucose Storage: \(#function) \(DebuggingIdentifiers.failed) failed to execute batch insert or merge changes: \(error)"
  91. )
  92. }
  93. debug(.deviceManager, "start storage cgmState")
  94. self.storage.transaction { storage in
  95. let file = OpenAPS.Monitor.cgmState
  96. var treatments = storage.retrieve(file, as: [NigtscoutTreatment].self) ?? []
  97. var updated = false
  98. for x in glucose {
  99. debug(.deviceManager, "storeGlucose \(x)")
  100. guard let sessionStartDate = x.sessionStartDate else {
  101. continue
  102. }
  103. if let lastTreatment = treatments.last,
  104. let createdAt = lastTreatment.createdAt,
  105. // When a new Dexcom sensor is started, it produces multiple consequetive
  106. // startDates. Disambiguate them by only allowing a session start per minute.
  107. abs(createdAt.timeIntervalSince(sessionStartDate)) < TimeInterval(60)
  108. {
  109. continue
  110. }
  111. var notes = ""
  112. if let t = x.transmitterID {
  113. notes = t
  114. }
  115. if let a = x.activationDate {
  116. notes = "\(notes) activated on \(a)"
  117. }
  118. let treatment = NigtscoutTreatment(
  119. duration: nil,
  120. rawDuration: nil,
  121. rawRate: nil,
  122. absolute: nil,
  123. rate: nil,
  124. eventType: .nsSensorChange,
  125. createdAt: sessionStartDate,
  126. enteredBy: NigtscoutTreatment.local,
  127. bolus: nil,
  128. insulin: nil,
  129. notes: notes,
  130. carbs: nil,
  131. fat: nil,
  132. protein: nil,
  133. targetTop: nil,
  134. targetBottom: nil
  135. )
  136. debug(.deviceManager, "CGM sensor change \(treatment)")
  137. treatments.append(treatment)
  138. updated = true
  139. }
  140. if updated {
  141. // We have to keep quite a bit of history as sensors start only every 10 days.
  142. storage.save(
  143. treatments.filter
  144. { $0.createdAt != nil && $0.createdAt!.addingTimeInterval(30.days.timeInterval) > Date() },
  145. as: file
  146. )
  147. }
  148. }
  149. }
  150. }
  151. }
  152. func syncDate() -> Date {
  153. let fr = GlucoseStored.fetchRequest()
  154. fr.predicate = NSPredicate.predicateForOneDayAgo
  155. fr.sortDescriptors = [NSSortDescriptor(keyPath: \GlucoseStored.date, ascending: false)]
  156. fr.fetchLimit = 1
  157. var date: Date?
  158. coredataContext.performAndWait {
  159. do {
  160. let results = try self.coredataContext.fetch(fr)
  161. date = results.first?.date
  162. } catch let error as NSError {
  163. print("Fetch error: \(DebuggingIdentifiers.failed) \(error.localizedDescription), \(error.userInfo)")
  164. }
  165. }
  166. return date ?? .distantPast
  167. }
  168. func lastGlucoseDate() -> Date {
  169. let fr = GlucoseStored.fetchRequest()
  170. fr.predicate = NSPredicate.predicateForOneDayAgo
  171. fr.sortDescriptors = [NSSortDescriptor(keyPath: \GlucoseStored.date, ascending: false)]
  172. fr.fetchLimit = 1
  173. var date: Date?
  174. coredataContext.performAndWait {
  175. do {
  176. let results = try self.coredataContext.fetch(fr)
  177. date = results.first?.date
  178. } catch let error as NSError {
  179. print("Fetch error: \(DebuggingIdentifiers.failed) \(error.localizedDescription), \(error.userInfo)")
  180. }
  181. }
  182. return date ?? .distantPast
  183. }
  184. func isGlucoseFresh() -> Bool {
  185. Date().timeIntervalSince(lastGlucoseDate()) <= Config.filterTime
  186. }
  187. func filterTooFrequentGlucose(_ glucose: [BloodGlucose], at date: Date) -> [BloodGlucose] {
  188. var lastDate = date
  189. var filtered: [BloodGlucose] = []
  190. let sorted = glucose.sorted { $0.date < $1.date }
  191. for entry in sorted {
  192. guard entry.dateString.addingTimeInterval(-Config.filterTime) > lastDate else {
  193. continue
  194. }
  195. filtered.append(entry)
  196. lastDate = entry.dateString
  197. }
  198. return filtered
  199. }
  200. // MARK: - fetching non manual Glucose, manual Glucose and the last glucose value
  201. // TODO: -optimize this bullshit here...I would love to use the async/await pattern, but its simply not possible because you would need to change all the calls of the following functions and make them async...same shit with the NSAsynchronousFetchRequest
  202. /// its all done on a background thread and on a separate queue so hopefully its not too heavy
  203. /// also tried this but here again you need to make everything asynchronous...
  204. /// let privateContext = NSManagedObjectContext(concurrencyType: .privateQueueConcurrencyType)
  205. /// privateContext.parent = coredataContext /// merges changes to the core data context
  206. ///
  207. func fetchGlucose() -> [GlucoseStored] {
  208. let predicate = NSPredicate.predicateForOneDayAgo
  209. return CoreDataStack.shared.fetchEntities(
  210. ofType: GlucoseStored.self,
  211. predicate: predicate,
  212. key: "date",
  213. ascending: false,
  214. fetchLimit: 288,
  215. batchSize: 50
  216. )
  217. }
  218. func fetchManualGlucose() -> [GlucoseStored] {
  219. let predicate = NSPredicate.manualGlucose
  220. return CoreDataStack.shared.fetchEntities(
  221. ofType: GlucoseStored.self,
  222. predicate: predicate,
  223. key: "date",
  224. ascending: false,
  225. fetchLimit: 288,
  226. batchSize: 50
  227. )
  228. }
  229. func fetchLatestGlucose() -> GlucoseStored? {
  230. let predicate = NSPredicate.predicateFor20MinAgo
  231. return CoreDataStack.shared.fetchEntities(
  232. ofType: GlucoseStored.self,
  233. predicate: predicate,
  234. key: "date",
  235. ascending: false,
  236. fetchLimit: 1
  237. ).first
  238. }
  239. private func processManualGlucose() -> [BloodGlucose] {
  240. let fetchedResults = fetchManualGlucose()
  241. let glucoseArray = fetchedResults.map { result in
  242. BloodGlucose(
  243. date: Decimal(result.date?.timeIntervalSince1970 ?? Date().timeIntervalSince1970) * 1000,
  244. dateString: result.date ?? Date(),
  245. unfiltered: Decimal(result.glucose),
  246. filtered: Decimal(result.glucose),
  247. noise: nil,
  248. type: ""
  249. )
  250. }
  251. return glucoseArray
  252. }
  253. private func processGlucose() -> [BloodGlucose] {
  254. coredataContext.performAndWait {
  255. let results = self.fetchGlucose()
  256. let glucoseArray = results.map { result in
  257. BloodGlucose(
  258. date: Decimal(result.date?.timeIntervalSince1970 ?? Date().timeIntervalSince1970) * 1000,
  259. dateString: result.date ?? Date(),
  260. unfiltered: Decimal(result.glucose),
  261. filtered: Decimal(result.glucose),
  262. noise: nil,
  263. type: ""
  264. )
  265. }
  266. return glucoseArray
  267. }
  268. }
  269. func nightscoutGlucoseNotUploaded() -> [BloodGlucose] {
  270. let uploaded = storage.retrieve(OpenAPS.Nightscout.uploadedGlucose, as: [BloodGlucose].self) ?? []
  271. let recentGlucose = processGlucose()
  272. return Array(Set(recentGlucose).subtracting(Set(uploaded)))
  273. }
  274. func nightscoutCGMStateNotUploaded() -> [NigtscoutTreatment] {
  275. let uploaded = storage.retrieve(OpenAPS.Nightscout.uploadedCGMState, as: [NigtscoutTreatment].self) ?? []
  276. let recent = storage.retrieve(OpenAPS.Monitor.cgmState, as: [NigtscoutTreatment].self) ?? []
  277. return Array(Set(recent).subtracting(Set(uploaded)))
  278. }
  279. func nightscoutManualGlucoseNotUploaded() -> [NigtscoutTreatment] {
  280. let uploaded = (storage.retrieve(OpenAPS.Nightscout.uploadedGlucose, as: [BloodGlucose].self) ?? [])
  281. .filter({ $0.type == GlucoseType.manual.rawValue })
  282. let recent = processManualGlucose()
  283. let filtered = Array(Set(recent).subtracting(Set(uploaded)))
  284. let manualReadings = filtered.map { item -> NigtscoutTreatment in
  285. NigtscoutTreatment(
  286. duration: nil, rawDuration: nil, rawRate: nil, absolute: nil, rate: nil, eventType: .capillaryGlucose,
  287. createdAt: item.dateString, enteredBy: "iAPS", bolus: nil, insulin: nil, notes: "iAPS User", carbs: nil,
  288. fat: nil,
  289. protein: nil, foodType: nil, targetTop: nil, targetBottom: nil, glucoseType: "Manual",
  290. glucose: settingsManager.settings
  291. .units == .mgdL ? (glucoseFormatter.string(from: Int(item.glucose ?? 100) as NSNumber) ?? "")
  292. : (glucoseFormatter.string(from: Decimal(item.glucose ?? 100).asMmolL as NSNumber) ?? ""),
  293. units: settingsManager.settings.units == .mmolL ? "mmol" : "mg/dl"
  294. )
  295. }
  296. return manualReadings
  297. }
  298. var alarm: GlucoseAlarm? {
  299. /// glucose can not be older than 20 minutes due to the predicate in the fetch request
  300. coredataContext.performAndWait {
  301. guard let glucose = fetchLatestGlucose() else { return nil }
  302. let glucoseValue = glucose.glucose
  303. if Decimal(glucoseValue) <= settingsManager.settings.lowGlucose {
  304. return .low
  305. }
  306. if Decimal(glucoseValue) >= settingsManager.settings.highGlucose {
  307. return .high
  308. }
  309. return nil
  310. }
  311. }
  312. }
  313. protocol GlucoseObserver {
  314. func glucoseDidUpdate(_ glucose: [BloodGlucose])
  315. }
  316. enum GlucoseAlarm {
  317. case high
  318. case low
  319. var displayName: String {
  320. switch self {
  321. case .high:
  322. return NSLocalizedString("LOWALERT!", comment: "LOWALERT!")
  323. case .low:
  324. return NSLocalizedString("HIGHALERT!", comment: "HIGHALERT!")
  325. }
  326. }
  327. }